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NCCS-NCMR : ProBioPred
Submit your genome for the potential probiotic prediction
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Please provide genomic DNA sequence in standard fasta format. Any inconsistancy in input genome sequence and it's format will leads into failure of instance.
NOTE:
Try to keep small fasta headers. In case of long headers (more than 50 characters), it will be reforamtted internally by ProBioPred. for more information please visit
help page
.
Bacillus
Bifidobacterium
Clostridium
Enterococcus
Lactobacillus
Lactococcus
Leuconostoc
Streptococcus
Not in the list
Select the appropriate genera for your input organism. It wil help us to choose the appropriate model while running ProBioPred.
The consisntacy of your results will be depend on this option.
Check this box if you already have 16S rRNA gene sequence for your genome.
If you have 16S rRNA gene sequence for your genome then use it to speed up your search. It help us to skip one step of 16S rRNA prediction.
Please paste 16S rRNA gene sequence in standard
fasta format
.
NOTE:
make sure to keep small and meaningful sequence header.
This genome label will be used in preparing the genome view for your results.The default genome label will be used as
GenomeLabel
.
NOTE:
Try to keep it short (max. 50 characters long) and meaningful. ProBioPred will automatically truncate the genome label beyond 50th character.
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Search for existing ProBioPred jobs
ProBioPred will try to search the results for the provided job id on server.
Please note that if your results are older than 15 days you wont be able to use this functionality
.
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